rs47363299 SNP Detail

Summary

• ID
  rs47363299
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95183616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCCAGTGC TTCAGAGGCA
  GGCAGATCTC TGACAAGGAC AGCCAGGGAC ACACACACAC ACACACACAC ACACACACAC
  ACACACACAC AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGACCCTGTC
  TTGAAAAGCA ACAAAACAAA AACAGCACTT GTTCTTGCAG AGGACTCTAG TTTGGTTTCC
  R
  ACATCTACAG AGTGGCTCAA AACCATCCCC TAACATCTAT TTCAGAGGAT CTGACACCTT
  CTTTCTTTTG AGAGCAACAG GCATGCATGT GATGTCCGTA TATACAGACA AGAAAAATAC
  TCATACACAT AAAAAAATAG GTCTAAAAAA ATTTGGTTTT AGAGAAAAAG GAAGACCATT
  AGTTGAAATA ATATATCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135510440	ENSMUSSNP6443631	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47363299					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95183616 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580883	regulatory region 580883	1641 bp distal
Rr580884	regulatory region 580884	652 bp proximal