rs47364964 SNP Detail

Summary

• ID
  rs47364964
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60869503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATCCTGTG AGGCTCGGAA
  CGGTGGCACC CGAAGCCATG GGTGCACACA CAAACAGGGC TCTAATCGGT GGGATCACAA
  TCCATGAACA AGCATGAGAC CTCCCTTCTT CTCACACACA CACACACACA CACACACACA
  CACACACTCA CTCACATACA TGAGCTGGTT TCCACAACTG TGGGGTTAGC CTGGAAGGTG
  Y
  CTGTCCTATA TAGTACTCCA GTACCAGTGT TGCAGACTCT AGGCCCAGGA AAAGGTTTTT
  GATGTTTGCT GGTGTTTTTG ATGACCTTCA TCGTGGGTAG AGCAGGCTGC GCTGGTTCAT
  AAAGAGAAGA CAAGACCTAG AGTGCTGTGA CCCTTTAAGG CATCATGGTG TGATGACCCC
  CAACCATAAA GTTATTTTCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52344308	NES15283566	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47364964					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52344308	NES15283566	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60869503 () rs orientation: forward

Symbol	Name	Function Class
Gm20610	predicted gene 20610	within coordinates
Gm20611	predicted gene 20611	within coordinates