rs47365717 SNP Detail

Summary

• ID
  rs47365717
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131708882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATAACTTT ATTTTAGAAA
  ATACAATCTA TTTTTCTTTA GATGTTCACA TTTTTATCTT TACAATGTTT TGGTTGAAAA
  ATTTTGATCG TGAAAGTGGT AAGGGATATC TGGACTGATA CCTAGAATTC TTAAAAACAA
  CAACAACAAA AAACTATATC AATTCAAGTT GGGCATGATG GCACAGGCCT GTAAACCTAG
  Y
  ACCTGGGAGG CGGATGATAG CAAGTTATAG GTAGGACAGG GCTACATAGT AAGGCTCTGT
  CTGAAAACAT AAACAAACAA ACAAACAAAT TCAACTCTCT TTTTTCTCTC TTTGTAGCCT
  AGGCTTGCCT TAAACAATCC GCTCGCCTCC AGAGAACTGG TATTACAGGT GTAATCTGCC
  ACACCCAGCT CCCTCACTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147472313	ENSMUSSNP5939984	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47365717					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131708882 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600833	regulatory region 600833	374 bp proximal
Rr600834	regulatory region 600834	527 bp proximal
Rr600835	regulatory region 600835	1193 bp proximal
Tssr43622	transcription start site region 43622	1155 bp downstream