rs47367387 SNP Detail

Summary

• ID
  rs47367387
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58736106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGGGCTG TGCCTGGTCC
  TGCACCACGG CTCAAACACT AGAAACAGCC TGTTCCATGT GGAGACATCT GTCACTCTGA
  GGGAAAGTTC TACAGAACTG CATCTTCATT CACTAGTGTC TTAGTCAGGG TTTCCATGAC
  TGTGAAGAGA CACCAGGACC ATGGCAATGC TTTTAGAGGA AAACATTTCA TTGAGGCTCA
  C
  TTACACTTTT CAGAGGTTTA GTCCATTATC ATCATGGTGG AAAGCATGGC GGCATGCAGG
  TAGACATGGT GCTGGAGAAG AAGCTGAGCA TTTTCCATCT TGCTCCTCAG ACAGGAAAAG
  GAGACTGCCA CACTAGGCCT AGCTTGAGCA TAGGAGACCA CAAAGCCCAT CTCCACAGTG
  ACATACTTCC TCCAACAAGG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132214896	ENSMUSSNP5869397	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47367387					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58736106 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2935	CpG island 2935	1749 bp proximal
Gm12258	predicted gene 12258	1878 bp upstream
Rr246822	regulatory region 246822	1494 bp proximal
Rr402593	regulatory region 402593	1611 bp upstream
Tssr101753	transcription start site region 101753	1873 bp upstream