rs47369288 SNP Detail

Summary

• ID
  rs47369288
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91339457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTGTGCA CTGAAATGAA
  TCTTGTCCTT CATAAGTTGC TTTTTCCAGT AGCAGGAAAA AAAAAACAAA GGCAAGTGGA
  GAGGCCAGTC AGGGGACCCA CGTATTGTCC TGGGAGGCCG TGACAGAGTT CCTTGCCTGT
  GGGATGTGTT CAGATGGAGA GGAGCTAGCA TTAACAGCCT ATGTGGGTCT CCAAAGCCTG
  W
  GTGGTCCTTT GTCTTCATCT CCCTTAGTCC TCCATTGGAA GTAGCAGAAG GCTCGGGCCT
  GGGTGCTGAT GTGAGGTCAC ATAGGCTGCA GTCTTTGTTC TCCCTTCCTG GTGTGAGACT
  TCTCGTCCAT AAGATGCTCT CACCTGTCAG CCGGGGGTTG GGGTTGGGGA AGGAAAGCTT
  CCTGGATGCT TGGGCTACAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60908888	NES16220811	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	T	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47369288					SNP	A	A	A	A	A	A	T	A	A	A	T	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60908888	NES16220811	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91339457 () rs orientation: forward

Symbol	Name	Function Class
Gm67851	predicted gene, 67851	within coordinates
Rr634457	regulatory region 634457	962 bp distal
Wnt7a	wingless-type MMTV integration site family, member 7A	1506 bp downstream