rs47370784 SNP Detail

Summary

• ID
  rs47370784
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13438670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TCTAGTACAG TTTGGAGACC TGGACAGAAT TCCTGACCGA GAGCCGCTGA
  Y
  GTCGCTGGTC ACGTTTATAT GTTATTACTG TGTGTAAAAA TGGTGTCGCT           
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	MSM/Ms	PWD/PhJ	WSB/EiJ
ss52145407	NES15236885	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	C	T	T		T	C
ss146822956	ENSMUSSNP6096743	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C					T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	MSM/Ms	PWD/PhJ	WSB/EiJ
rs47370784					SNP	C	C	C	C	C	C	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52145407	NES15236885	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13438670 () rs orientation: forward

Symbol	Name	Function Class
Adat2	adenosine deaminase, tRNA-specific 2	within coordinates
Gm66583	predicted gene, 66583	792 bp upstream
Rr427807	regulatory region 427807	1309 bp proximal
Rr427808	regulatory region 427808	1802 bp proximal