rs47373883 SNP Detail

Summary

• ID
  rs47373883
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16805260 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T CCCTTCCTCC CACTCCCACT TCTTGGCCCT GGCATTCCCC
  TGTACTGAGG CATATAAAAT CTGCACGACC AATGGGCCTC TCTTTCCACT GATGGCTGAC
  C
  AGGCCATCTT CTGATACATA TGCAGCTAGA GACACGAGCT GCAGGGGGTA CTGGTTAGTT
  CATATTGTTG TTCCACCTAT AGGGTTGCAG TTCCCTTTAG C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146485689	ENSMUSSNP6694038	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47373883					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16805260 () rs orientation: reverse

Symbol	Name	Function Class
Rr370925	regulatory region 370925	1588 bp upstream