rs47375475 SNP Detail

Summary

• ID
  rs47375475
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:4027315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGA TTTTTACGAA AGATTTAAAG
  Y
  TTTTAAATTT AAATATTTTT AAACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147038935	ENSMUSSNP6609943	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47375475					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:4027315 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6911	CpG island 6911	1540 bp distal
Gm2093	predicted gene 2093	within coordinates
Rr369897	regulatory region 369897	881 bp downstream
Rr498629	regulatory region 498629	1786 bp distal
Rr498630	regulatory region 498630	992 bp distal