rs47377273 SNP Detail

Summary

• ID
  rs47377273
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72542547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGGAGATCAG GGAGCCCACA GATGCCCCTG CCCCTGCTCC
  AGACACCATG TAAGAGTGAC ACATGAGTAG CTGCTTTCCT AGGAGGCAGG GCTCTGGTCC
  M
  GCCGTGCACA GCTAGTTACT GATCCCTCAG AGAAAGCCTA GGCAGAGGGA CGATGTGGGT
  ACACGGACGC AGCTTGAGAA GGCTGCAGAG TACCATGCAA C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148102868	ENSMUSSNP4385200	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47377273					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72542547 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	1940 bp distal
Trappc9	trafficking protein particle complex 9	within coordinates