rs47378208 SNP Detail

Summary

• ID
  rs47378208
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:124411744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAAACACA ATCTTTAGAC
  GTTGATGATG GTCAGAGGTT GGCTTATTTC TGAAATAATA ACAATCAGAC AAAGGACAAT
  AAAAATGTGC AATGCCACAA GTCTCTAACC TCCTGAGTAG ACAGAGGTGG TAGCTCCTGA
  TTGAAATGAC TTTCGCAACA CAGAGAAATC AGAGAAACCA TGTTCACTTC AAACCTGGAG
  W
  CTGAGCTCTC CTATATGTAT CTCCGACATT CTAAAATTCA ATCTTTTGAG GTCGTACTCC
  ATAGTATTTT TAAAAATACT TACTATTGTC CTTCAAATGA AATCTCTTCT TTCCTTAAGT
  TATATCCATA AATCGCAAAT TTAACTAAAA GAATCACATT GCCAAGGGCA GAAATGTCCA
  AGATACATTG AAGAAATGGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60792946	NES16469189	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47378208					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60792946	NES16469189	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:124411744 () rs orientation: forward

Symbol	Name	Function Class
Dpp10	dipeptidylpeptidase 10	within coordinates
Tssr13333	transcription start site region 13333	1669 bp downstream