rs47395407 SNP Detail

Summary

• ID
  rs47395407
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:16428480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACATGCAGA TAGACAGAAA
  CACAAACACA GAGAGAGAGA GAGACAGATG GAGACAAGAG ACTTAAGAGA CTGACCAAGT
  TAGAGACACA GATAGTCAGA GACACAGGGA GATCGAGACT ACTGACAGAC TAGGACAGCT
  AGAAGTATGA GAGGGGTGTA TCAAAACAGG CAGTGACTGG CAAGAGAAAG GAGCAGAGAT
  Y
  CTCCTGGGGC CCTGGAAAGA AACGAAGGGT TCTAGACCCG AGTAGAGAAC AGCAAAATAG
  AAACATCTCT GAGCAAAAAG GAGATATTGA GGGTCTGGGG AACAAAATAA TAATTACAGA
  TCCTGAGGAC AAATGACAGA GTGAAAGTAC CTTATAGAAT GACAGGCAAA TAGAAATGCC
  AGACATATCG TCAAACAAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52154397	NES15233824	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47395407					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52154397	NES15233824	PERLEGEN	MM_PANEL	f	SNP	C/T