rs47417190 SNP Detail

Summary

• ID
  rs47417190
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70059765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACT GTGCTTGGGT TCTATGGTCT
  Y
  ATCACCTCAC CCACTCAGCC TCGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss132366983	ENSMUSSNP5185129	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47417190					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70059765 () rs orientation: forward

Symbol	Name	Function Class
Clec10a	C-type lectin domain family 10, member A	within coordinates
Rr251315	regulatory region 251315	1903 bp distal
Tssr102662	transcription start site region 102662	1741 bp downstream
Tssr102663	transcription start site region 102663	1717 bp downstream