rs47420753 SNP Detail

Summary

• ID
  rs47420753
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27722406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCCAAGG ATGTGTCTGG
  AAGAATAGCA ATCTGTGGTG AGCAGAGGCA GCAGCCACTT GGTGGACAGA AGTTCTTAAA
  GTAGGAAGTT TTGTCCTGGA GAGAAGGCAG AAGCTGTGGT TCCATGGACA TTGACACGGG
  GTGCTTGTAT ATGTATTTAC ACGACACGGC AGTAAGAAAC CCACGAAGGC TTATGTGACT
  R
  TGGCCCGGTA CCTTGTCTAA GACCACGTAT GTTAAAGGTG AGTGTGTATA GTACATATAT
  GTGTGTTTTC TATTTTTTGG TGCTTGGGCT TGAACCAAAG CATACTGAAG TGACTTATGA
  ATAACAGCTA GGACTCTAGT CACAAGGCTC TGGGTCTCAT CAAGTATTTC ATAAACTGGA
  CAGGGCAACA CAGGTTCCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148886326	ENSMUSSNP6469962	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47420753					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27722406 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	1573 bp upstream
Gm45470	predicted gene 45470	within coordinates
Gm63998	predicted gene, 63998	1003 bp downstream
Rr381848	regulatory region 381848	1528 bp upstream
Tssr80798	transcription start site region 80798	1531 bp upstream