rs47424684 SNP Detail

Summary

• ID
  rs47424684
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:29529340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTATTTAA GACCTAAGAT
  TTTATCCCCA AAAAAGTCAG AACATAAGGC TATTTATTCT GGTATTAATC TTAGAGCATT
  CAGACTTAAA AAAAAAGAGA TTAAAGCAAA GAGAAGAAAA AAAAAAAAAA AAAAAAACCA
  CCAAAGCATC ACTGTGTCTT TCTGCTTTGC AGCAATCATC ATTCTGGCCT TTCCAGAGTC
  R
  TTAGCTGTTC TGGACACAGT GACCTGTTCC TTCCTTCTCA CATTTTCTTA GCTAGTTTTC
  TGTTGAGCCC ATTGTCGGTC TAAGAAATAC TAAAATGGCC TTTCATAACT ATGTTTTCTT
  TTGTGTTGTA CATAATCTAT TTTCATTTCA CTGCAAATTC TGTGTTGAAC TTGCTTGGCT
  TGTTGCTTTC AGACATAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63009274	NES17433181	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47424684					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63009274	NES17433181	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:29529340 () rs orientation: forward

Symbol	Name	Function Class
4930578E11Rik	RIKEN cDNA 4930578E11 gene	429 bp downstream