rs47428347 SNP Detail

Summary

• ID
  rs47428347
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127903924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TATTGAGAAA TGACTTGGTT ATTAAAGTCC TCACGCAGCC ATGAGGACCC
  R
  AGTTCAAGTC CCAGGATCTG ATGTATCACA CACCCGTAGT CTTAGTGCTG AGGAGGCAGG
  AATGATGCTC TCTGGGCCTT TCTGGCCAGT CAGTCTTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147550435	ENSMUSSNP7170850	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47428347					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127903924 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Rr397293	regulatory region 397293	713 bp downstream
Rr397294	regulatory region 397294	202 bp downstream
Rr564634	regulatory region 564634	113 bp distal
Tssr20040	transcription start site region 20040	1096 bp upstream
Tssr20041	transcription start site region 20041	1117 bp upstream