rs47428774 SNP Detail

Summary

• ID
  rs47428774
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43449200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAGGTGGA GACAGGAGGG
  TTCCAGGGTT TGTCAGTCAA CCATCGTAGC CTAATGATCC AGGTTCAATG ACAGACCCCA
  TCTCAATACA TACATGTGGT GAAGCACGGG CACTTTGGGT TTTTTTAAAT TATATCTATT
  TATTTGTGTA TATGTGTATG TATGAGCACG TGCACATATG CATGCCCCAG AATACATGCA
  M
  AGGTCGGAGG ACAGTCTGTA GGGATCAGTT GTTGCCTCCC ACTCTTCTGC TCCTGGGGGC
  TAGAACCCAG GTTGTGAGCT TGGCAGCAAG CACCTTCAGA CCCTGCTTTT TCCCACGCTC
  TAGGGCCCAG ACCCGTCATC ACCCAGCCTC CATGATCCAA GAGGGCCCAA ACTCCTTTCT
  TATTCGTGAG CCAAACATTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149084135	ENSMUSSNP2275646	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47428774					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43449200 () rs orientation: forward

Symbol	Name	Function Class
Klk8	kallikrein related-peptidase 8	within coordinates
Rr646024	regulatory region 646024	1459 bp distal
Tssr66053	transcription start site region 66053	1680 bp downstream