rs47431179 SNP Detail

Summary

• ID
  rs47431179
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:66214148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGCCAGG GGAGCTTAGG
  TCATGGGCTG TGCCCTTGCA ACTCTGGAAT TCTGGTCCCT TCCACTCTTA CTTCCTGGAC
  ACTGAGTGAC AGGACCCCTA GCCACGAACT CCCGCCCTGG TACACTACTG GCAGCGTGGT
  GTGCGGTGTG ATAGGGCTAA GCAGCCTGGA GGAGGCCTCT CAGACTGCCC CCCAATAAAC
  C
  TCATCTTCTC TAACGTTGAT TGAAGGGGGG GGGTGTCTTT TGTCACGTGA CAGGAAGCTG
  ACTGACACAG ACTCTCAGTC GGCTACAAGC TCCAGACATA TGCATGAAGT TATTGTGTAC
  TCCCTCCTCC TCTCCTCTAT CTCCCCCCCA CCCTCCCGTT CTGGGCACAG GGATAGACTC
  TGAAGGCTTG AGAGCTGCCA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss145842064	ENSMUSSNP4134664	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs47431179					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:66214148 () rs orientation: forward

Symbol	Name	Function Class
Gm49871	predicted gene, 49871	within coordinates
Gm65032	predicted gene, 65032	91 bp downstream
Rr340106	regulatory region 340106	347 bp distal
Rr340107	regulatory region 340107	within coordinates