rs47431496 SNP Detail

Summary

• ID
  rs47431496
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85940549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATACTCATGC AAAGAACATT CCTGGGCACC CTCTGGGTTA
  TGCCAGGCTC TGGCTGTTGC GTGTATCTGC TGGTTGTCTT CCTGATGCGG TGATGCTATG
  K
  CCTCTGGTGG CTCAGCTTGA CCAGAAGCCC CAGCATCTCC CAGGCTCCCT TCCCATCACC
  ATTAACACAT GCAGGCTGAA CCGGAAACAG CAGAGATGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148282832	ENSMUSSNP6740294	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47431496					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85940549 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7499	CpG island 7499	1603 bp proximal
Gm41375	predicted gene, 41375	within coordinates
Gramd4	GRAM domain containing 4	1347 bp upstream
Rr507408	regulatory region 507408	1624 bp distal
Rr507410	regulatory region 507410	18 bp proximal
Rr507411	regulatory region 507411	895 bp proximal
Rr507412	regulatory region 507412	1889 bp proximal
Rr507413	regulatory region 507413	1905 bp proximal