rs47431762 SNP Detail

Summary

• ID
  rs47431762
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:139730373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTC TTAATCTCAG CCTTACCGAG
  K
  AACTCATACC AAGTTAGATC CTCAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147687480	ENSMUSSNP2437718	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss321386350	CHEV_4_139558977	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47431762					SNP	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139730373 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15184	CpG island 15184	1536 bp proximal
Rr377291	regulatory region 377291	528 bp downstream