rs47435682 SNP Detail

Summary

• ID
  rs47435682
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:5350456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATGCTGA GGTAAGACAT
  GTGCTAAGGC AGGTCCCATG GAGGATATGT GATATTTGGA GAGAGTATAA AAAGGACTTG
  ACCAACAGTG ATGGAGACAG AGCTTGGCTT GTTTATAGAA CTAGCTGTGC AATCCTTGTA
  GGTCTGGAAT CTTTGCTGAT CTTCACTTCC CTGAGAGAGG CACAGCTGAG AACTTCTCCT
  C
  GCATTCATTC CTTCTGGCCC CTTCTGACTT GTGCCAAGGC TGAGGCCTGG CTGTCTCTGT
  TAGGTAGTGT GACCACTGCT GATTCGTGTT TGCTATCCTG ACTCTACCGA CAGGACTGCT
  GGTGTGTCCA TAGAGTGTTT GTGAGTGGAT TGAGCTGCTG CAGCCAACCT GTAAACAACA
  CAGACAAGAG TTATTCCAAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss146577995	ENSMUSSNP6591635	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss325518188	CHEV_18_5350454	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs47435682					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:5350456 () rs orientation: forward

Symbol	Name	Function Class
Gm50064	predicted gene, 50064	within coordinates
Gm52372	predicted gene, 52372	1307 bp downstream
Gm58537	predicted gene, 58537	within coordinates