rs47436633 SNP Detail

Summary

• ID
  rs47436633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:154064081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGAAGGATG GCACCTAAAT TTAAGTCAAC TTGATTGTTG
  GTGGTGACAT TTATTTGAGA TAGCAATGTC TGGAAGACGA ACAGGTTTGG GAAATTCAGT
  Y
  TTTGGACGGT TAAGTTTAGG ATGTTAATGA GTTCAGTAGG CAGTGGAATG TACAAATTTA
  GAACCCAGAG ATGTATATTT GGTAGTCTTT AGAATAGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145757225	ENSMUSSNP4146984	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47436633					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154064081 () rs orientation: forward

Symbol	Name	Function Class
Rr420823	regulatory region 420823	333 bp proximal
Rr420824	regulatory region 420824	1779 bp proximal