rs47445706 SNP Detail

Summary

• ID
  rs47445706
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141429445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACATTAAA GCAGGAATAT
  TTCACTGTTA ATAAGTGGCC AAAGCTCTGA AGATTAATCT AACTCTCTCC AAATATGCCC
  AATTGCTTGG TTCTCAGCAC TTATATCCTG TTAACTGCTA AATTTTATGA TTTAAGAATA
  AATTCTACTC TACTGTGACA AGATAATTGG CCCCTTCCAT CATCATTGGA GGACAGGTAT
  R
  TTTTTTTCCT TTTAAAAATG TATTAATGTC TAATGTGCCC GTGAAATTCT TTTATTTGAT
  AAGGAAGCAC TTTGAAAATA CAGTGAAACA ATTTATTTTT AATCAAAAGT CTATTCTGTG
  CCTCTGACCA TCACACTTGT AAAAGGAATT GAGAAATCAT TTGAAAGTTA AAAACTGTGA
  AGCAAATAGA GCCACTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss61091320	NES16613469	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs47445706					SNP	G	G	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61091320	NES16613469	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141429445 () rs orientation: forward

Symbol	Name	Function Class
Rr74631	regulatory region 74631	1852 bp proximal
Unc5c	unc-5 netrin receptor C	within coordinates