rs47447613 SNP Detail

Summary

• ID
  rs47447613
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120550648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGG GAGGCAGAGG CAGGAAGAAA
  K
  CTGTGAATTT AAGACCAACA TGGAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147367292	ENSMUSSNP2267443	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320479600	CHEV_2_120545903	CHEVERUD	SCREENING_POP	f	SNP		T	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47447613					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120550648 () rs orientation: forward

Symbol	Name	Function Class
Cdan1	codanin 1	within coordinates
Rr37786	regulatory region 37786	1353 bp proximal
Stard9	StAR related lipid transfer domain containing 9	within coordinates