rs47450551 SNP Detail

Summary

• ID
  rs47450551
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:104896040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CACAAAATAA ATGAAATGTC TGGGTTTGGA CAACGGGCCC
  ACCCAAGCCT TTTCTGACCT CGCTGCTCAA ACGGCTCAAG CTTCCCCCCC CCCAACCCCC
  A
  AAACAGACCC AGTGAGCTGA GATCAACCCC TCTATGTGTT CAGAAGGGAA GCCAGTCAAG
  GATGCTGAGT CCCAAATGAA CGGTTGCCCA CAGAGGCTGG G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145730336	ENSMUSSNP3963812	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47450551					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:104896040 () rs orientation: forward

Symbol	Name	Function Class
Bean1	brain expressed, associated with Nedd4, 1	1070 bp upstream
Cpgi20895	CpG island 20895	612 bp proximal
Rr182550	regulatory region 182550	220 bp distal
Rr185841	regulatory region 185841	760 bp proximal
Tssr79035	transcription start site region 79035	1130 bp upstream