rs47461583 SNP Detail

Summary

• ID
  rs47461583
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:19725169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATATGATG TTCTCCTGTA TTTTTATCTT CTGTCTCTTG
  CAAATTCCCA AATTTATATC TGCCATTATG TTTAATATCA GTAGATGTTA TTACATAATT
  W
  CTGAAGAATT TCACCATGAA GGAGATGTTG TGATTGGTGC CTTTTTCCCC CTGCATACTT
  TCTACACTGA GAAGAAAATG CCACATTCAA CTCTACCATA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	PWD/PhJ	WSB/EiJ
ss60546297	NES16566031	PERLEGEN	MM_PANEL2	f	SNP	T	T	A	T	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	PWD/PhJ	WSB/EiJ
rs47461583					SNP	T	T	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60546297	NES16566031	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:19725169 () rs orientation: forward

Symbol	Name	Function Class
Vmn2r100	vomeronasal 2, receptor 100	within coordinates