rs47471754 SNP Detail

Summary

• ID
  rs47471754
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124794899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCAA TCAGAGGTCT TATATTCTCC
  R
  TATTTTATCT TAAAAATGTA AAAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145839279	ENSMUSSNP4322	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss322856159	CHEV_8_126592060	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47471754					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124794899 () rs orientation: forward

Symbol	Name	Function Class
Gm29897	predicted gene, 29897	within coordinates
Rr672611	regulatory region 672611	915 bp distal
Rr672612	regulatory region 672612	1963 bp proximal
Tssr80018	transcription start site region 80018	1372 bp downstream
Tssr80019	transcription start site region 80019	1364 bp downstream
Tssr80020	transcription start site region 80020	1021 bp downstream