rs47486255 SNP Detail

Summary

• ID
  rs47486255
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:37905527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCAGGTC GGGCGGACCC
  CTGTGCTCTC ACCAGGAAGG TGGCCAGTTG TCTGGAGCTG AAGATGGCGC CGCCTCAGAA
  AAGAATTGTT CTTGAGAAGG AGCAGATATC ATTTAAATCA GCACTTCCCT GCATGCTTTC
  TCTATATCTA AAACTATTTT AATTGTTAAA ATTCTGGCCA CAATTCCTAT CTAATAAATT
  Y
  GTCACTACCT TGAAATTAAC AGTTAAAAAC TTTCTAGAAC TGAACGTACT TTTTGACATA
  AACATTAATT TTTATTATTT TGTCACTGAC TTTTAAATTC ATTCCGATTT ATGAGTAAGC
  ATTGATATAC TTTATTGTAC ATTGTATATT AGAGATTTCT ATTTTATTTT TGTATTAAAA
  TACATTCTAT TCCTCACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61270713	NES16888721	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47486255					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61270713	NES16888721	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:37905527 () rs orientation: forward

Symbol	Name	Function Class
Gm67610	predicted gene, 67610	within coordinates
Gm67614	predicted gene, 67614	within coordinates