rs47492774 SNP Detail

Summary

• ID
  rs47492774
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92701658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAAGAGCA GTCAGTGTTC
  TTGCCCACTG AGCCATCTCT CCAGCCCTGC CTTGCCCTTT TAATATGTTG AAATCTTAAT
  CCTAACACCC AGGACATGGT ATTAAGAACA CCATTTAGGG CTGGAGAGAT GACTCAGCAT
  TTAAGAGCAT TGTTTCCAGC AACCACAAGG TAGCTTACAA CCATCTGTAA TGGGATCAGA
  Y
  GCCCTCTTCT GGTGTCTGAA GAAAGCAACA TATTTAAAAT AAATAAATCT TAAACATCAA
  CAACAAAAAC ACCATTTAGT CAGTTCCTTT CTGTTACAAC AGAATACCTG AGACTGGGTA
  ACTTATAAAG AATAGTGCTT TACTTTGTTT GGTCCTTGGT TCAGTAGGTA GCTGCATGGT
  GAGGGCCACA TGTTGCTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148834737	ENSMUSSNP4414953	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47492774					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92701658 () rs orientation: forward

Symbol	Name	Function Class
Fam47e	family with sequence similarity 47, member E	1270 bp upstream
Tssr47317	transcription start site region 47317	1236 bp upstream