rs47495916 SNP Detail

Summary

• ID
  rs47495916
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102336293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAATGTTA AGTTTCTTTA
  TGCGATTTTG TTCTCCAGAG TGAACTTTGT AGACTACAAT ATCAAAAGGT TGCACCTAGC
  AACCAGTGCC TCCACGGTCC TCAGGGCCGC GAAGGGAGGG GGAAGAGCCT GGAAGCGGCA
  GAAACCAGCC TCGGGTCTGG AAGCAGTGGC GGTCCGTGCC TTCCTGACCT TCGGGCACTA
  G
  GCAGTTCCCC AGGGCGGTGG GATTGGGAAC AGGGGAGGGT AAAGAGGGCA GGACCTGTGT
  TGTCCTCCAA AGAGGTCTGC TGTCGCCTCC TTCTCTAAGC AGCTGTGGAG GCGCGGGGCT
  CCAGCGGTCC AATCCGCAGC GTAGGAAGCA GCGGGGCGCT CGCCCGCCGC CGGAAGCCGC
  GATAGCAGCG GGGGCGAGGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145571425	ENSMUSSNP3436962	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47495916					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102336293 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	within coordinates
Gm45527	predicted gene 45527	867 bp upstream
Rr652623	regulatory region 652623	within coordinates
Rr652624	regulatory region 652624	174 bp proximal
Trim68	tripartite motif-containing 68	within coordinates
Tssr73953	transcription start site region 73953	166 bp downstream