rs47497186 SNP Detail

Summary

• ID
  rs47497186
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:164035809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATAGCTTA ATGAAACAAC
  CCCATTTATG GGGTTCCTCT GGAAGAGGAA GAAGAAATAT TTCAGGAGCA AAAATCCTAT
  TCATACATTT ATCATTTCCA CTTCTTGTGA TGTGTATTGT TCCCAAAGGG CCTGTTCTAG
  GAAAAATCAA GAATTCAACT TTGCTGATAT ATCCGCCTAG GCAGCCCAGT AGCTCTACAG
  T
  GAATTGGCAG GGAATAAATA ACTTTATCTT ATGACCTTGT AATTATTTCC CAAATTCCGT
  TTATCTTACC TACATTGACT CACACGCAAA ACCTCCAACA AGATTCACAG GGTTCTATCA
  CCTAAGGAAG AGGGTCTCAA TGTTTATGCT AGCCATTCAT CTAGTCAAGA AACATTACGA
  TCAAAGTATC TCTTAAAATT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss145974615	ENSMUSSNP2861042	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs47497186					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164035809 () rs orientation: forward

Symbol	Name	Function Class
F5	coagulation factor V	Intron
Rr422161	regulatory region 422161	252 bp proximal