rs47500148 SNP Detail

Summary

• ID
  rs47500148
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:70869466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GATTTTATTT TGTGAGAGCA GGCTTTTAAA AATAGCGGCA
  TCGTGGTAAT GTGAATTTCC CCTGCAACTT TCTTGATTGC CCATGGCTGC AATGGTTTCA
  K
  TGCATATGGA CAATGTGGCT GTTCCCAAGC TCTCGGGAGT AGAAGCCATT ACAACTGAGA
  CCTTTCTCAC CGCCTTGGCT AGAATATCTC ATAAACAAGA A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss145884240	ENSMUSSNP5151901	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs47500148					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:70869466 () rs orientation: forward

Symbol	Name	Function Class
Dlgap1	DLG associated protein 1	within coordinates
Rr342743	regulatory region 342743	267 bp distal
Tssr145664	transcription start site region 145664	721 bp downstream