rs47503380 SNP Detail

Summary

• ID
  rs47503380
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71042500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCT GAGCAGAACA GCAATGGCTT
  S
  TGCTGTAAGA TCAAGAATTG ACAAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss132382589	ENSMUSSNP624804	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
ss323739580	CHEV_11_70965176	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47503380					SNP	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71042500 () rs orientation: forward

Symbol	Name	Function Class
Nlrp1b	NLR family, pyrin domain containing 1B	1428 bp downstream