rs47505153 SNP Detail

Summary

• ID
  rs47505153
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116241612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACATACA CACATAGAAA
  CACACAACAC ACACATACAC ACAGACACAC ACACACACAC ACAGAGAGAG AGAGAGAGAG
  AGAGAGAGAG AGAGAGAGAG AGAGTAGCAA ATATCGATGT CTAAGGTAAT GAACGCAGCC
  TGGCTGTGTG AGAGCCCATC AGCCTTCACC TGTTATTTAT AGCACTGTTG TTTACCCCAC
  R
  TCAGCACAGG CATCTCTGAA TTGGAGATGA CTAACAGTTT GGGTTGACTT GGTTTAATTA
  GACTGAATTA ATATGGCCAC CGTACAGTTG TGTGGGAGGG CCATTCATTA ATCATCTAAA
  CTAGATGTTG ATGTTTCCAA ATGTAAAACA CTCTTCCCCC AAATTTGGAC TGAATTTATG
  CACTCTTATG CCTGCCTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss135669743	ENSMUSSNP504568	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320895024	CHEV_3_116150881	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47505153					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116241612 () rs orientation: forward

Symbol	Name	Function Class
Gm22361	predicted gene, 22361	428 bp downstream
Gm66091	predicted gene, 66091	within coordinates