rs47505864 SNP Detail

Summary

• ID
  rs47505864
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46458332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCCAGAAC CAAGTAAACT
  GGGTAGGGAG GCTTATGCCA AGGACCCCAA CATTCAGGAA GTAAAGAAAA GCTGAGGGGC
  AAGGCTATCC TCTCCTGCAC AAGAGACCTC CAAAAACAGA AAGCAAAACA GCAGCAACAA
  CAACCCTGGA GCCTCTAGGC CAAAAGTCTA AATCAAAAGT GTTAGGAAAA TTTCATACAG
  C
  TTTATTCATC TCATCATATT TAAAATCATG AGTAACACCC ACATTATCAT CCTGATAACA
  GTTCTGAAAA TCCATAGCAT GAAGCAGGGA AGGACCACCT CCATTATTAG AGGGATCTAC
  TGACACAGCC TTGCTTTCTA CTCCCAAACA GATCCTCCTG GCGCAGGGGC CTCTGGGAGC
  CAATCACTGA TTCGGGGGAC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145697410	ENSMUSSNP2913719	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47505864					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46458332 () rs orientation: forward

Symbol	Name	Function Class
Mad2l1bp	MAD2L1 binding protein	within coordinates
Rr341808	regulatory region 341808	932 bp distal
Rr341809	regulatory region 341809	269 bp proximal