rs47512102 SNP Detail

Summary

• ID
  rs47512102
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104817530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAAAAGAA GGGAGGATGG
  AGGCTGCTTT GTGGATTTTT CCAAATGTCA GGTCCCTTTC GTTTCAGTGC CGCATCTTGT
  ACTTGGCTCC CTTTGAACAG TTTCTGAAAT GACATAAACC AAGTCTAGAG CTAAGAATGA
  TAAATCCTGG CTTACCCTTA AGCCATGAGG TGTTCAGTGG AATAAATCAG GAGAGGGGGC
  A
  GGGTGGGTGA GACAAACAGG ATTCAATTAA AAGTCTTGAA GAGAGTGAGA GCCATCCTGG
  AGAACCTGGG CCTTAAAGCT TTTCTACAAC CTACTCCTTC CTCTCTCACC CCTCCCTTCT
  CTCTCCCTTA GCAGTTAAGC CTGCACCCAG CATGCCTGAT TGCACTGACA TTTAAAACAC
  ATTATGGCAG ACATCCCATG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136903140	ENSMUSSNP5784292	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss323171229	CHEV_9_104842661	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47512102					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104817530 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Rr202430	regulatory region 202430	127 bp proximal