rs47513919 SNP Detail

Summary

• ID
  rs47513919
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31092311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCAGAGGCG TTGGCGGGGT GCTGCTTACT GGCTTGCTCC
  TCGTGGCTTG CTCAGCCTTT TTTTTTTTTT TTTTTTTTTT TTTTATTGTA GAACCCAGGA
  T
  TCCCAGCTCA AGGATGGCAT GCTAGACCTC CCCCCTTGAT AACTAATAGA GAAAATTCTT
  ACAGCTGAAT CCCATGGAGG CATCTCCTCA GCTGAGGCT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145451142	ENSMUSSNP1520660	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss325357665	CHEV_17_31010282	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47513919					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31092311 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8937	CpG island 8937	1156 bp proximal
Dnah8	dynein, axonemal, heavy chain 8	within coordinates
Gm9937	predicted gene 9937	524 bp downstream
Gm50252	predicted gene, 50252	within coordinates
Rr330582	regulatory region 330582	1911 bp distal
Rr330583	regulatory region 330583	890 bp proximal
Rr341199	regulatory region 341199	911 bp distal
Rr341200	regulatory region 341200	891 bp proximal
Tssr147267	transcription start site region 147267	1694 bp downstream