rs47517928 SNP Detail

Summary

• ID
  rs47517928
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:76792708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTTCTAA TCACAGGATT
  TATATTATCT AATTATATTA TTTTGAATAG ACCTAGTTTA CTTCTCCTCT GTACATTTTC
  TCCCATCATC AAAATTTCTT ATTAATTGAT TAATTAACAT CTCAAGGGCT GGCCCTCTCC
  TGGTTCCCCC TCACTGAGAC CCTTCCTACA TCTCCCTCCC CTTCTTCTCT GAGAGGATGC
  Y
  CCTCCACTGA GTATCTCCCA ACCCTGGCTC ATCAAGTCTG CCAGATTAGG TGCATCCTCT
  TTCACTGGGG CCAGATAAGG CAGCCCTCCC TGTTGGTGAA ACGATGTCAC AATGAAGCTA
  GAGCTTTAGG GAGAGTCTCC ACTCCAGTTG TTGGGAGGCC CACATGGAGA CTGAGCTGCA
  CATCTGCTAC ATATGTGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144717372	ENSMUSSNP4938733	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47517928					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:76792708 () rs orientation: forward

Symbol	Name	Function Class
Gm70762	predicted gene, 70762	within coordinates