rs47518583 SNP Detail

Summary

• ID
  rs47518583
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:140827705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGATGAC TTAATATGGT
  CATGGAAAAC TAAGTGGGAC CCTGCAGAAG GGAGGAAACC ATATACAGAC TAGATGCTCA
  GATCTCACTC TTACTGTGGC CTACATCTGG TCTCAAAATG TTCTACAAGT AAACAAACAA
  ATGCACACAC AACCCTGAGG ATGGCAGTAA AAGGTACCTT TTCAAGGTGT ATTTCTTGAA
  R
  CTGTGCCTCG TGGGAGCGTG CATGTGTCCT GAGTTTAAAA GAGCACCAGG AAGAAAGATT
  GCAAATTCAA GGGCTACCTG GGTAGCTTAG CTAGACCCTA TCAGGAAAAA ATAAACAGCC
  AGTGAACCAC AGCAATAACT AGAATAGAAA GATAACTGTC AGGGTGCAAT AGCGGCACAC
  ATACCTTGGA GATAACCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	MSM/Ms	SM/J
ss147693536	ENSMUSSNP321622	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss320529297	CHEV_2_140811521	CHEVERUD	SCREENING_POP	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	MSM/Ms	SM/J
rs47518583					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:140827705 () rs orientation: forward

Symbol	Name	Function Class
Macrod2	mono-ADP ribosylhydrolase 2	Intron
Rr566134	regulatory region 566134	within coordinates