rs47518835 SNP Detail

Summary

• ID
  rs47518835
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:135238300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCTTTAAT CCCAGCACTT
  GGGAGGAAGA GGCAGGTGGA TTTCTGAGTT CAAGGCCAGC CTGGTCTACA AAGTGAGTTC
  CAGGACAGCC AGGGCTACAC AGAGAAACCC TGTCTCGAGA AGAAAAAAAA GGAAGTTCAA
  AATAGCATTT TAAGCTTAAG TTTTGCATTA GATCCATTTA ACACACTTGA ATAAGCCGGG
  Y
  GTGGTGGTGC ACGCCTTTAA TCCCAGCACT TGGGAGGCAA AGGCAGGCGG ATTTCTGAGT
  TCGAGGCCAG CCTGGTGTAC AGAGTGAGTT CCAGGACAGC CAGGGCTACA CAGAGAAACC
  CTGTCTCAAA AAACCAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAACAA AAACAAAAAA
  CAAAAAACAA AAAAACCACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145530372	ENSMUSSNP7226260	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47518835					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135238300 () rs orientation: forward

Symbol	Name	Function Class
Rr419124	regulatory region 419124	816 bp proximal
Timm17a	translocase of inner mitochondrial membrane 17a	Intron