rs47525584 SNP Detail

Summary

• ID
  rs47525584
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114633732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCCCTTTC CTTTGGTCTG
  TGCTCCACAT TTTGTCCCCA TAATTCCTCC TGTGAGTATT CGTTTTCCTC TTCTAAGTGA
  CACAGAAACA TCCACAATTT GGTCTTCCTT CTTTAACTTC ATATGATCTG TGAATTTTAT
  TTTTAGTATA CTGAACTTTC TGGCTAATAT CCCATTATTA GTGAGTGAAC ACAATGTGTG
  T
  TCTTTTGTGA CTTGGTTACC TCACTCAGGA TACTTTCAAG TTCCATCCAT TTGCCTGTGA
  AATTCATGAA GGCATTTTTT TTAAATAGGG GAATAGTATT TCATTTTGTA AATATACCAC
  ATTTTCTGTA TACATTCTTC TGGTGAGGGA TAACTGGGTT GTTTTCAGCT TCTAGCTATT
  ATGAATATAG TGACTATGAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138795000	ENSMUSSNP66665	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47525584					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114633732 () rs orientation: forward

Symbol	Name	Function Class
Gm46322	predicted gene, 46322	1111 bp upstream
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv1-17-1	immunoglobulin heavy variable V1-17-1	1856 bp downstream
Rr473858	regulatory region 473858	1527 bp distal