rs47530048 SNP Detail

Summary

• ID
  rs47530048
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34609546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAAACCCAA CTAAGACACT GAAAGAAAGA TGAAATTTCA
  AGACCTGTAA GTCATGTAAA GTACTCAGAA ATTGCTGGTT GTTTGTGAGC CTAGAGGCTG
  S
  CTGGGGCCGA GAACAAAGCA GAACAGACAG GGCTGTTGTT AAGACATTCC TAAGAACAGC
  TTGACTGTAA AAATGAAAAA ATGCAAGGAC GCAGGCAAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148891590	ENSMUSSNP4849562	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47530048					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34609546 () rs orientation: forward

Symbol	Name	Function Class
Gm19225	predicted gene, 19225	752 bp upstream