rs47531851 SNP Detail

Summary

• ID
  rs47531851
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:16728876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCCGTAT CATCGAAAAG
  AGCACTCCAC ACCCACCCCA ACCCCGCAAA AGAACCAAGG AGCTGAGAGT GAGGAGAGTC
  CCGCAGATGG TCACTCCTCC ACTTCGGCTG GTTGTAGGTA CCTATGACAG CAGCAATGGC
  AGCGACAGTG AGTTGAGTGA CTTCGATACC TCCAAAGTCA AAGGCAACAG GAGCTCCTCC
  G
  GGAGGACCAG GAAGGTGCGC AAAATGCCGG TCAGTTACTT GGGCAGCAAA TTCCTGGGCA
  GCGATGTGGA GAGTGAGGAT GATCAGGAGC TGGTGGAGGC CTTCCTCCGC CGTGGGGAGA
  AGCCCAGCGC GCCTCCTCCA CGACGCCGAG TCAATCTTCC AGTGCCCATG TTTGAGAACA
  ACCTGGGGCC CCAGCCATCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148402197	ENSMUSSNP684930	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47531851					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16728876 () rs orientation: forward

Symbol	Name	Function Class
Ccdc8	coiled-coil domain containing 8	Coding-NonSynonymous
Cpgi18410	CpG island 18410	within coordinates
Tssr64672	transcription start site region 64672	1139 bp downstream
Tssr64673	transcription start site region 64673	1025 bp downstream
Tssr64674	transcription start site region 64674	912 bp downstream