rs47532805 SNP Detail

Summary

• ID
  rs47532805
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191477103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATCTGGGGAG GAGAAAACAG GCCTACTAAA CAGCCAGTCT
  AGCCAATTGA TGAGCCTCCA GGTTCATTGA TACACCCTCT CCCAGAATAC AAAATAGAGA
  M
  CCATTGAGGA ATACATAGAC TTTGGTCTTT GGTTGCCACA CGTGTGCAAA CTTGCACTTG
  TACAGACTCA TACACCATCC ATATACATAC ATTAGAGAAT C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146510381	ENSMUSSNP6738055	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47532805					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191477103 () rs orientation: forward

Symbol	Name	Function Class
Lpgat1	lysophosphatidylglycerol acyltransferase 1	within coordinates
Tssr10784	transcription start site region 10784	1851 bp downstream