rs47532925 SNP Detail

Summary

• ID
  rs47532925
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124020032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCCTCTTC TGTCCACTGT
  GGGCACTGCA CACATGCAGT GCACAGACAT ACACGCAGGC AATGCTCGTA TTACACATAG
  AATAAAATAA ACCTAAAATA GAAGAAAATT ACAAAGAATA TAGCTTTAGT TTTCCCATAA
  CTTTACCACA AAATAATAAG TTTAAATCAC ATCTTCATGA ACAAATACTT TCTTCTCAAA
  M
  AAAAAGTCAG CATCTATCAT GATGAATTTT GAATCATACT TGTGTTGGAG ATAAGAATAT
  TAGCTCTGAT ACAAATATTG ATTACTCGAG GTCAACTTTA AGAAATTACT AACAATTCTT
  GCTAACATAC AAGAACGTGG ACTTGCAGGA TTTAGAGGCA CACCTAGCCT ATCATCATTT
  ATTTTTGTGC TTGAAACAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135782607	ENSMUSSNP647921	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
ss320926411	CHEV_3_123929301	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47532925					SNP	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124020032 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	183 bp distal