rs47533650 SNP Detail

Summary

• ID
  rs47533650
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121613544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTTTCCAA ACCTCCCACC
  CCAGGAACTG AGGGAACACG CCAGTCACTT CCTCCCTGGA GGTTTTATTC TTTCTGCCTT
  AGATTACCAG ACAGTCTTTG CCCTGTTTCC CACTCAGTGC ACTCTAAAAG ATAAAACTCT
  CCTTTCCAGA CTCTGGTAGG ATCTGAAACT TCAATTTGTA TTTGAGTTTT GACACAGGTA
  R
  CGAAGCTCTC CCCCTCAACG AAGGCAATGC TGTATAGAGC CTGTTCTCCA AATTGGAGAA
  AAGGGAAGAA GAAAATGTCT AATTTGATAT CTCAAGAAGT TATCTTGTGA GTCACCCATT
  GAGGACACAC CTACAAGTAA ATAAAATGGC CCTGCCCTCT CATGATTAGC AATGTGAACA
  AAGACACAGT CAAAAGGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135729750	ENSMUSSNP6351154	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47533650					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121613544 () rs orientation: forward

Symbol	Name	Function Class
Rr584177	regulatory region 584177	within coordinates
Rr584178	regulatory region 584178	1840 bp proximal