rs47534124 SNP Detail

Summary

• ID
  rs47534124
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:45606593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCATAGTG CCTGTTTAGA
  TATCAAAGGG CAACTTTGTG GATTTGGTTT ATTTCCTCCA TTTTTCTTGG ATTTTGGAGA
  ATAAATATAG GTTAGTAGGC GAGTGAAGCA ACTACCGTCA CCCTCTGAGA CATATCCCCT
  GTCCTAGAAG AGACTTTTTT TTTTTGACTG AAAAAAAGTC TGTAAGCAAT GATTACAAAC
  W
  AAACTTACTA ATTAGAAGAA ATGACCAGAG GTAGCTGGCA TCTCTGGCTT GCTCTTTGAT
  GGAGTGATTT AAGCTGTGCT CCTGAGTCTA GCCCCTTTAG CTGCCCTGTT CTCTAAATGC
  AACTTTTTCA TATAGACTGT TCTCCTACAA CTTTAGTGTT TGCAAATGTT ACATGGAGGG
  AAAGACTGAC TTAGCTAATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss52410605	NES15387118	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs47534124					SNP	T	T	T	T	T	A	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52410605	NES15387118	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:45606593 () rs orientation: forward

Symbol	Name	Function Class
Rr267454	regulatory region 267454	609 bp proximal