rs47539237 SNP Detail

Summary

• ID
  rs47539237
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28092191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAA TGATTTTGTC TTATTACAAA
  R
  GAAAATTAGA AAAATGAAGT AAGTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss147906717	ENSMUSSNP4788134	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325123273	CHEV_16_28273525	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs47539237					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28092191 () rs orientation: forward

Symbol	Name	Function Class
Fgf12	fibroblast growth factor 12	within coordinates
Tssr140647	transcription start site region 140647	869 bp downstream