rs47545754 SNP Detail

Summary

• ID
  rs47545754
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:140809410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAAAAATAA GTCAATAGAC ACTTTCTGAG AAAGTAAGAA
  GGCCGAGGGA TGTTACACAT GTGGGCACCT TTTGCCATTT TTCTCTGTTA TAATTCCACA
  Y
  CTATAAATTA AAAATCTATG TGCAGATATG TACATGTACA GTAATCATCT TTTTTTATTA
  GATATTTTCT TTATATACAT TTCAAATGCT ATCCCAAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147692932	ENSMUSSNP1791465	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss320529147	CHEV_2_140793226	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47545754					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:140809410 () rs orientation: forward

Symbol	Name	Function Class
Macrod2	mono-ADP ribosylhydrolase 2	within coordinates
Tssr20486	transcription start site region 20486	1544 bp downstream