rs47546083 SNP Detail

Summary

• ID
  rs47546083
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:80450259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTT CATCTTCAGC TCTGGATCCT
  K
  GATCACAACC AGTGGTCGAT AGCCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147590229	ENSMUSSNP5476745	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47546083					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:80450259 () rs orientation: forward

Symbol	Name	Function Class
Ctdp1	CTD phosphatase subunit 1	915 bp downstream