rs47551812 SNP Detail

Summary

• ID
  rs47551812
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:104306972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAA GAAGCTGGCT TTGAAGAATC
  M
  AGATAAAAAT ATTGTCTTCT CCCCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138018988	ENSMUSSNP3228693	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47551812					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104306972 () rs orientation: forward

Symbol	Name	Function Class
Serpina3k	serine (or cysteine) peptidase inhibitor, clade A, member 3K	Coding-NonSynonymous
Tssr114843	transcription start site region 114843	1612 bp downstream
Tssr114844	transcription start site region 114844	1476 bp downstream
Tssr114845	transcription start site region 114845	1444 bp downstream
Tssr114846	transcription start site region 114846	1355 bp downstream
Tssr114847	transcription start site region 114847	1332 bp downstream
Tssr114848	transcription start site region 114848	225 bp downstream
Tssr114849	transcription start site region 114849	192 bp downstream
Tssr114850	transcription start site region 114850	148 bp downstream
Tssr114851	transcription start site region 114851	75 bp downstream
Tssr114852	transcription start site region 114852	43 bp downstream
Tssr114853	transcription start site region 114853	141 bp upstream
Tssr114854	transcription start site region 114854	284 bp upstream
Tssr117574	transcription start site region 117574	156 bp downstream